Browse of TCMCG057C25893 protein

CDS

Accession Number	TCMCG057C25893
gbkey	CDS
Protein Id	XP_018432638.1
Location	complement(join(25676492..25676565,25676662..25676770,25676849..25676959,25677095..25677208,25677311..25677445,25677521..25677669,25677759..25677837,25678000..25678152,25678234..25678290,25678375..25678457,25678550..25678607,25678609..25678650,25678733..25678939,25679029..25679439))
Gene	LOC108805163
GeneID	108805163
Organism	Raphanus sativus

Protein

Length	593aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018577136.1
Definition	PREDICTED: LOW QUALITY PROTEIN: prolycopene isomerase, chloroplastic [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	H
Description	isomerase
KEGG_TC	-
KEGG_Module	M00097        [VIEW IN KEGG]
KEGG_Reaction	R07512        [VIEW IN KEGG]
KEGG_rclass	RC01960        [VIEW IN KEGG]
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG]
KEGG_ko	ko:K09835        [VIEW IN KEGG]
EC	5.2.1.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00906        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] ko01110        [VIEW IN KEGG] map00906        [VIEW IN KEGG] map01100        [VIEW IN KEGG] map01110        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009657        [VIEW IN EMBL-EBI] GO:0009662        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016491        [VIEW IN EMBL-EBI] GO:0016853        [VIEW IN EMBL-EBI] GO:0016859        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046608        [VIEW IN EMBL-EBI] GO:0055114        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAATCTGTGTCTTCACAATCCGTTAACGTGTGTTGATCGCAGCTCCTCCTTCTTCTCGGCCTCGAAGACTTCAAATCACAAGCTGGGTACTTTAAAGTTAGGGTTTTTAAAGCATCGGAAGAAGAATCATACGGTTACAGTGAGATCTGTTTCTTCCACTTCTGTAGAAGAAAGGACGAAGAAGAGAGATGAAAGAAGTGGAGGAGGAGGAGAGGGACAAGTGTACGACGCAATCGTCATCGGCTCAGGGATCGGAGGCTTGGTCGCGGCGACTCAGCTATCAGTTAAAGAAGCTAAAGTGTTAGTGCTGGAGAAGTATCTGATCCCTGGAGGGAGCTCTGGTTATTACGAGAGAGATGGGTACACTTTCGATGTTGGCTCTTCCGTCATGTTTGGTTTCAGCGATAAGGGGAATCTAAACTTGATAACTCAGGCGTTGAAGGCAGTTGGTCGTGAGATGGAGGTTATACCTGATCCCACCACTGTTCATTTCCATCTCCCCGATGATCTCTCTGTTCAGGTTCATAGAGGGTACGATGAGTTCGTTAACGAGCTTGTTAGCAAGTTTCCTCACGAGAAGGATGGGATTCTTGGATTCTATGGTGACTGCTGGAAGATCTTTAACTCATTGAACTCTTTGGAACTGAAGTCGCTTGAAGAGCCTATCTACCTTTTTGGACAGTTCTTTCAGAAGCCGCTTGAATGCTTGACACTCGCTTATTACTTGCCTCAAAATGCTGGGGATATAGCTCGCAAGTATATAAAGGATCCTCAATTACTGTCTTTCATTGACGCTGAGTGTTTCATTGTGAGCACAGTCAATGCTTTGCAGACGCCAATGATCAATGCAAGTATGGTTTTATGTGACAGGCACTATGGAGGAATTAACTACCCGGTTGGTGGTGTTGGTGGGATTGCAAGGTCTTTAGCAGAAGGGCTTGTTGATCAAGGCAGTGAAATACTCTACAAAGCTAATGTCAAAAGCATAATACTTGATGATGGAAAGGCTGTCGGTGTAAGGCTAGCAGATGGAAGAGAATTCTTCGCTAAGACGATAATTTCTAATGCTACAAGATGGGATACATTTGGGAAGCTGTTGAAAGGAGAAAAGCTTCCAAAAGAAGAAGAAAATTTCCAGAAAGTCTATGTGAAGGCTCCATCATTTCTTTCAATCCACATGGGTGTTAAAGCAGAGGTTCTCCCTCCAGACACAGATTGCCATCATTTCGTACTTGAGGATGATTGGAAGAATCTGGAGAAGCCTTATGGCAGTATCTTCCTCAGCATTCCAACCATTCTTGATCCATCTTTGGCTCCAGATGGTCGACATATACTCCACATATTTACAACCTCTTCCATCGAGGATTGGGAGGGACTCACTCCTAAAGAGTATGAGGCGAAAAAAGAAGAGGTAGCAGCTGGAATCATACAGAGGCTAGAGAAAAAACTGTTTCCTGAGCTCAGTTCATCTATTACGTTTAAGGAGGTGGGCACACCAAGAACACACAGGCGATATCTTGCTCGGGATAAGGGAACTTATGGGCCAATGCCAAGAGGAACACCAAAAGGTTTACTAGGCATGCCGTTTAACACAACTGCGATAGATGGTTTGTACTGCGTTGGGGATAGTTGTTTTCCTGGTCAGGGAGTTATAGCTGTGGCTTTCTCAGGAGTGATGTGTGCGCATCGTGTAGCTGCTGACATTGGGCTTGAGAGAAAATCAAAGGTACTTGATGCTGGTCTTCTTGGTTTACTTGGTTGGCTAAGGACACTCGCATAG

Protein:   MNLCLHNPLTCVDRSSSFFSASKTSNHKLGTLKLGFLKHRKKNHTVTVRSVSSTSVEERTKKRDERSGGGGEGQVYDAIVIGSGIGGLVAATQLSVKEAKVLVLEKYLIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALKAVGREMEVIPDPTTVHFHLPDDLSVQVHRGYDEFVNELVSKFPHEKDGILGFYGDCWKIFNSLNSLELKSLEEPIYLFGQFFQKPLECLTLAYYLPQNAGDIARKYIKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHYGGINYPVGGVGGIARSLAEGLVDQGSEILYKANVKSIILDDGKAVGVRLADGREFFAKTIISNATRWDTFGKLLKGEKLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWKNLEKPYGSIFLSIPTILDPSLAPDGRHILHIFTTSSIEDWEGLTPKEYEAKKEEVAAGIIQRLEKKLFPELSSSITFKEVGTPRTHRRYLARDKGTYGPMPRGTPKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLERKSKVLDAGLLGLLGWLRTLA